Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pabpn1Q8CCS6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pabpn1Q8CCS6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Gm8956-201ENSMUST00000203939 825 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Gm45094-201ENSMUST00000207013 617 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Gm7082-201ENSMUST00000209880 969 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Gm5451-201ENSMUST00000080545 579 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pabpn1Q8CCS6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm43267-201ENSMUST00000199664 1796 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm11500-201ENSMUST00000118237 601 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm13624-201ENSMUST00000120263 462 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm13445-201ENSMUST00000121664 307 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm29808-201ENSMUST00000194419 468 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 AC121960.1-201ENSMUST00000227982 564 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm5537-201ENSMUST00000091117 1252 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.32■□□□□ 0.68
Pabpn1Q8CCS6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm23272-201ENSMUST00000104053 129 ntBASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm17192-201ENSMUST00000169031 511 ntBASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm28833-201ENSMUST00000189671 559 ntBASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pabpn1Q8CCS6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pabpn1Q8CCS6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms