Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim9Q8C7M3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Gm12384-201ENSMUST00000119228 919 ntBASIC14.04□□□□□ -0.16
Trim9Q8C7M3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim9Q8C7M3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gm6222-202ENSMUST00000182143 629 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gm27731-201ENSMUST00000185192 107 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim9Q8C7M3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim9Q8C7M3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm13226-201ENSMUST00000117838 404 ntBASIC14.02□□□□□ -0.17
Trim9Q8C7M3 Gm11964-201ENSMUST00000120982 444 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms