Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Gm22133-201ENSMUST00000102082 109 ntBASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Gm19091-201ENSMUST00000208120 978 ntBASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Gm9111-201ENSMUST00000219394 709 ntBASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cfap54Q8C6S9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm15703-201ENSMUST00000120250 880 ntBASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Mir1956-201ENSMUST00000157748 65 ntBASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cfap54Q8C6S9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm14921-201ENSMUST00000118643 908 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cfap54Q8C6S9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 332.4 ms