Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm12477-201ENSMUST00000121221 571 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Mir7023-201ENSMUST00000185093 64 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm18766-201ENSMUST00000189811 808 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Olfr286-202ENSMUST00000205305 969 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim35Q8C006 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Gm11868-201ENSMUST00000121594 1478 ntBASIC14.12□□□□□ -0.15
Trim35Q8C006 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim35Q8C006 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm26254-201ENSMUST00000122491 118 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm22730-201ENSMUST00000158085 171 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm25144-201ENSMUST00000179561 110 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm25352-201ENSMUST00000179815 110 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm28927-201ENSMUST00000191528 272 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm37328-201ENSMUST00000193191 640 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm18789-201ENSMUST00000216115 550 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 AC118230.1-201ENSMUST00000220196 656 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 AC192333.2-201ENSMUST00000224771 196 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms