Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm27046-201ENSMUST00000182160 463 ntBASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm38317-201ENSMUST00000195564 343 ntBASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sh3rf2Q8BZT2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm12997-201ENSMUST00000120207 640 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm3096-201ENSMUST00000185770 364 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sh3rf2Q8BZT2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf2Q8BZT2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms