Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup54Q8BTS4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm4986-201ENSMUST00000119731 549 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm37489-201ENSMUST00000191883 159 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm45925-201ENSMUST00000218882 744 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nup54Q8BTS4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm12241-201ENSMUST00000118330 726 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm8018-201ENSMUST00000173536 789 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm6007-201ENSMUST00000208170 823 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm9368-201ENSMUST00000219348 831 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Morn2-202ENSMUST00000227729 656 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup54Q8BTS4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nup54Q8BTS4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms