Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Gm44980-201ENSMUST00000205826 314 ntBASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm26286-201ENSMUST00000104166 134 ntBASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm14314-201ENSMUST00000118225 1015 ntBASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm7395-201ENSMUST00000216059 1045 ntBASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col16a1Q8BLX7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Col16a1Q8BLX7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Col16a1Q8BLX7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Gm12857-201ENSMUST00000117678 592 ntBASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Gm43520-201ENSMUST00000197996 164 ntBASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col16a1Q8BLX7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Rn7s6-201ENSMUST00000175005 291 ntBASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gm2517-201ENSMUST00000215651 348 ntBASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col16a1Q8BLX7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms