Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Mir7076-201ENSMUST00000183519 74 ntBASIC17.78■□□□□ 0.44
Usp54Q8BL06 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gm5705-201ENSMUST00000066241 711 ntBASIC17.78■□□□□ 0.44
Usp54Q8BL06 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp54Q8BL06 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.77■□□□□ 0.44
Usp54Q8BL06 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm28686-201ENSMUST00000187404 609 ntBASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm43520-201ENSMUST00000197996 164 ntBASIC17.77■□□□□ 0.44
Usp54Q8BL06 Gm18974-201ENSMUST00000221478 1031 ntBASIC17.77■□□□□ 0.44
Usp54Q8BL06 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Usp54Q8BL06 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp54Q8BL06 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Usp54Q8BL06 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp54Q8BL06 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Usp54Q8BL06 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC17.77■□□□□ 0.43
Usp54Q8BL06 Gm9129-201ENSMUST00000218173 1689 ntBASIC17.77■□□□□ 0.43
Usp54Q8BL06 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Gm24891-201ENSMUST00000104391 136 ntBASIC17.76■□□□□ 0.43
Usp54Q8BL06 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Gm9132-201ENSMUST00000210182 832 ntBASIC17.76■□□□□ 0.43
Usp54Q8BL06 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 AC091458.1-201ENSMUST00000220902 1361 ntBASIC17.76■□□□□ 0.43
Usp54Q8BL06 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp54Q8BL06 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm13263-201ENSMUST00000121271 838 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm18711-201ENSMUST00000199341 750 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Snora73b-201ENSMUST00000083419 205 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms