Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gm5687-201ENSMUST00000118252 640 ntBASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chmp2bQ8BJF9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chmp2bQ8BJF9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm37917-201ENSMUST00000194711 392 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms