Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Atg4bQ8BGE6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Atg4bQ8BGE6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Atg4bQ8BGE6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm25927-201ENSMUST00000175058 117 ntBASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4bQ8BGE6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12□□□□□ -0.49
Atg4bQ8BGE6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4bQ8BGE6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms