Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Mir671-201ENSMUST00000102432 98 ntBASIC16.16■□□□□ 0.18
Shank2Q80Z38 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm22877-201ENSMUST00000175451 105 ntBASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm5621-201ENSMUST00000187303 640 ntBASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm44958-201ENSMUST00000203734 736 ntBASIC16.16■□□□□ 0.18
Shank2Q80Z38 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 CT025553.1-201ENSMUST00000226292 299 ntBASIC16.16■□□□□ 0.18
Shank2Q80Z38 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank2Q80Z38 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm13916-201ENSMUST00000117368 628 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm5100-201ENSMUST00000195631 589 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm43692-201ENSMUST00000198236 1062 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm19640-201ENSMUST00000214849 464 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Arhgef33-207ENSMUST00000224966 490 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.15■□□□□ 0.18
Shank2Q80Z38 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.15■□□□□ 0.18
Shank2Q80Z38 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm8737-201ENSMUST00000122208 642 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm25201-201ENSMUST00000083093 170 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 n-R5s211-201ENSMUST00000093689 119 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shank2Q80Z38 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.14■□□□□ 0.17
Shank2Q80Z38 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Shank2Q80Z38 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shank2Q80Z38 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms