Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm9083-201ENSMUST00000120423 819 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm11637-201ENSMUST00000120601 592 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Mir1943-201ENSMUST00000158276 73 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm8738-201ENSMUST00000172606 329 ntBASIC14.75□□□□□ -0.05
Prpf40bQ80W14 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.75□□□□□ -0.05
Prpf40bQ80W14 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm14208-201ENSMUST00000119645 678 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm20426-201ENSMUST00000173657 440 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Prpf40bQ80W14 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm23270-201ENSMUST00000104055 131 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12616-201ENSMUST00000118594 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12624-201ENSMUST00000177615 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12621-201ENSMUST00000177760 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12615-201ENSMUST00000177970 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12622-201ENSMUST00000177975 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12627-201ENSMUST00000178412 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12625-201ENSMUST00000179122 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm12614-201ENSMUST00000179586 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms