Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddx55Q6ZPL9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm11628-201ENSMUST00000117568 171 ntBASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm10051-201ENSMUST00000145209 414 ntBASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm18038-201ENSMUST00000197900 485 ntBASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ddx55Q6ZPL9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Gm18304-201ENSMUST00000189162 546 ntBASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx55Q6ZPL9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm22133-201ENSMUST00000102082 109 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm11989-201ENSMUST00000117240 672 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm11362-201ENSMUST00000118838 850 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm43962-201ENSMUST00000203898 190 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm10752-201ENSMUST00000218348 729 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms