Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.77□□□□□ -0.69
Rif1Q6PR54 Gm13624-201ENSMUST00000120263 462 ntBASIC10.77□□□□□ -0.69
Rif1Q6PR54 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Gm8100-201ENSMUST00000182906 988 ntBASIC10.77□□□□□ -0.69
Rif1Q6PR54 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.77□□□□□ -0.69
Rif1Q6PR54 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rif1Q6PR54 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm13809-201ENSMUST00000117921 597 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm12196-201ENSMUST00000120954 262 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm13019-201ENSMUST00000120000 276 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm7722-201ENSMUST00000120646 741 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Mir6407-201ENSMUST00000184510 101 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gm6304-201ENSMUST00000096579 447 ntBASIC10.76□□□□□ -0.69
Rif1Q6PR54 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Rif1Q6PR54 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms