Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Ntng1-201ENSMUST00000051253 327 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm14644-201ENSMUST00000116671 647 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm11450-201ENSMUST00000121144 333 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm19459-201ENSMUST00000176240 835 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm44126-201ENSMUST00000204831 514 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Snrnp40Q6PE01 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm15432-201ENSMUST00000121106 195 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms