Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm13916-201ENSMUST00000117368 628 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm11663-201ENSMUST00000117888 290 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm11511-201ENSMUST00000118146 540 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Rprl1-201ENSMUST00000158050 327 ntBASIC13.6□□□□□ -0.23
ShbQ6PD21 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.6□□□□□ -0.23
ShbQ6PD21 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm14193-201ENSMUST00000105067 153 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm12948-201ENSMUST00000119406 682 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm13263-201ENSMUST00000121271 838 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ShbQ6PD21 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm19640-201ENSMUST00000214849 464 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm9797-202ENSMUST00000218003 294 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Gm19009-201ENSMUST00000223072 823 ntBASIC13.59□□□□□ -0.23
ShbQ6PD21 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.59□□□□□ -0.23
ShbQ6PD21 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
ShbQ6PD21 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ShbQ6PD21 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ShbQ6PD21 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShbQ6PD21 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ShbQ6PD21 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShbQ6PD21 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm22920-201ENSMUST00000102175 109 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm24231-201ENSMUST00000104315 133 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm26013-201ENSMUST00000104404 119 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm14219-201ENSMUST00000120414 288 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm7722-201ENSMUST00000120646 741 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm43778-201ENSMUST00000199438 199 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm35713-201ENSMUST00000210516 199 ntBASIC13.58□□□□□ -0.24
ShbQ6PD21 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms