Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm6458-201ENSMUST00000211573 635 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smarcd3Q6P9Z1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Cog3-203ENSMUST00000227473 4197 ntBASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Mir7654-201ENSMUST00000185082 70 ntBASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smarcd3Q6P9Z1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm5866-201ENSMUST00000177881 973 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd3Q6P9Z1 Gm16372-201ENSMUST00000073088 450 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms