Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm12363-201ENSMUST00000122250 668 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Gm6091-201ENSMUST00000098307 165 ntBASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sp140Q6NSQ5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm24644-201ENSMUST00000157114 139 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm4271-201ENSMUST00000174444 973 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm32025-201ENSMUST00000217960 307 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sp140Q6NSQ5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm27847-201ENSMUST00000183711 107 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Gm27375-201ENSMUST00000183799 107 ntBASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sp140Q6NSQ5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms