Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm27331-201ENSMUST00000183705 60 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm29649-201ENSMUST00000185649 419 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ParpbpQ6IRT3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm15222-202ENSMUST00000228667 1726 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm16479-201ENSMUST00000121706 932 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm26185-201ENSMUST00000157692 266 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm6266-201ENSMUST00000203844 806 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm25857-201ENSMUST00000082788 129 ntBASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
ParpbpQ6IRT3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm12390-201ENSMUST00000117897 397 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms