Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
VcanQ62059 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
VcanQ62059 Gm23085-201ENSMUST00000157849 293 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VcanQ62059 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.64□□□□□ -0.55
VcanQ62059 Gm29808-201ENSMUST00000194419 468 ntBASIC11.64□□□□□ -0.55
VcanQ62059 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VcanQ62059 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
VcanQ62059 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.63□□□□□ -0.55
VcanQ62059 Gm8451-201ENSMUST00000170338 447 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm9135-201ENSMUST00000182963 990 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.63□□□□□ -0.55
VcanQ62059 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm7536-201ENSMUST00000077389 444 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gm5453-201ENSMUST00000080866 447 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
VcanQ62059 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
VcanQ62059 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.63□□□□□ -0.55
VcanQ62059 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.63□□□□□ -0.55
VcanQ62059 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.63□□□□□ -0.55
VcanQ62059 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.63□□□□□ -0.55
VcanQ62059 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Gm16380-201ENSMUST00000077997 478 ntBASIC11.63□□□□□ -0.55
VcanQ62059 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.63□□□□□ -0.55
VcanQ62059 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
VcanQ62059 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VcanQ62059 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VcanQ62059 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm22711-201ENSMUST00000116890 133 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm11989-201ENSMUST00000117240 672 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm11362-201ENSMUST00000118838 850 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm19587-201ENSMUST00000191395 545 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm2965-201ENSMUST00000198365 343 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm43969-201ENSMUST00000204833 535 ntBASIC11.62□□□□□ -0.55
VcanQ62059 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.62□□□□□ -0.55
VcanQ62059 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.62□□□□□ -0.55
VcanQ62059 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VcanQ62059 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Gm29304-201ENSMUST00000186555 695 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm29223-201ENSMUST00000188867 695 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm37921-201ENSMUST00000194333 695 ntBASIC11.62□□□□□ -0.55
VcanQ62059 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
VcanQ62059 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms