Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Gm12165-201ENSMUST00000117047 342 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.14□□□□□ -0.47
Rai1Q61818 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rai1Q61818 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Gm5455-201ENSMUST00000058710 715 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Rai1Q61818 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.14□□□□□ -0.47
Rai1Q61818 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rai1Q61818 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.14□□□□□ -0.47
Rai1Q61818 Gm807-202ENSMUST00000224929 408 ntBASIC12.14□□□□□ -0.47
Rai1Q61818 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rai1Q61818 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.13□□□□□ -0.47
Rai1Q61818 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.13□□□□□ -0.47
Rai1Q61818 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rai1Q61818 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.13□□□□□ -0.47
Rai1Q61818 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.13□□□□□ -0.47
Rai1Q61818 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.13□□□□□ -0.47
Rai1Q61818 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm1821-202ENSMUST00000227415 750 ntBASIC12.13□□□□□ -0.47
Rai1Q61818 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.13□□□□□ -0.47
Rai1Q61818 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Rai1Q61818 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rai1Q61818 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rai1Q61818 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms