Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.28□□□□□ -0.6
Cd55bQ61476 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cd55bQ61476 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Gm12363-201ENSMUST00000122250 668 ntBASIC11.28□□□□□ -0.6
Cd55bQ61476 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.28□□□□□ -0.6
Cd55bQ61476 Gm25927-201ENSMUST00000175058 117 ntBASIC11.28□□□□□ -0.6
Cd55bQ61476 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.28□□□□□ -0.6
Cd55bQ61476 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
Cd55bQ61476 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cd55bQ61476 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cd55bQ61476 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd55bQ61476 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.27□□□□□ -0.6
Cd55bQ61476 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cd55bQ61476 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Cd55bQ61476 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd55bQ61476 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cd55bQ61476 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd55bQ61476 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cd55bQ61476 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cd55bQ61476 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm17420-201ENSMUST00000164753 153 ntBASIC11.27□□□□□ -0.61
Cd55bQ61476 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm27514-201ENSMUST00000183692 110 ntBASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm27572-201ENSMUST00000183702 255 ntBASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm37042-201ENSMUST00000193816 581 ntBASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm4768-201ENSMUST00000206199 686 ntBASIC11.27□□□□□ -0.61
Cd55bQ61476 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cd55bQ61476 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.27□□□□□ -0.61
Cd55bQ61476 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cd55bQ61476 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cd55bQ61476 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms