Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Gm14719-201ENSMUST00000121891 340 ntBASIC12.17□□□□□ -0.46
Nr1h4Q60641 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.17□□□□□ -0.46
Nr1h4Q60641 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.17□□□□□ -0.46
Nr1h4Q60641 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.17□□□□□ -0.46
Nr1h4Q60641 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nr1h4Q60641 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Gm19220-201ENSMUST00000222682 803 ntBASIC12.16□□□□□ -0.46
Nr1h4Q60641 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.16□□□□□ -0.46
Nr1h4Q60641 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Map1b-203ENSMUST00000223725 2669 ntBASIC12.16□□□□□ -0.46
Nr1h4Q60641 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nr1h4Q60641 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm22189-201ENSMUST00000103822 86 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm13813-201ENSMUST00000120998 787 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm44124-201ENSMUST00000204159 472 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms