Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm37466-201ENSMUST00000195692 652 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm30285-201ENSMUST00000214614 422 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shroom1Q5SX79 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm14704-201ENSMUST00000120300 874 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Mir3102-201ENSMUST00000175555 104 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Mir433-201ENSMUST00000093564 124 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.56□□□□□ -0.24
Shroom1Q5SX79 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Gm13492-201ENSMUST00000119772 665 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Gm26461-201ENSMUST00000175064 290 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 Gm26956-201ENSMUST00000182176 986 ntBASIC13.55□□□□□ -0.24
Shroom1Q5SX79 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms