Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm13736-201ENSMUST00000119272 253 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm13342-201ENSMUST00000121055 207 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm38266-201ENSMUST00000194931 421 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm44405-201ENSMUST00000198952 126 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm43822-201ENSMUST00000200285 476 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps54Q5SPW0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Gm2546-201ENSMUST00000182630 991 ntBASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Gm43758-201ENSMUST00000199500 367 ntBASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps54Q5SPW0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps54Q5SPW0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms