Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm13315-201ENSMUST00000120376 991 ntBASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm6963-201ENSMUST00000147879 379 ntBASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc88aQ5SNZ0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm9211-201ENSMUST00000182882 975 ntBASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc88aQ5SNZ0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm19353-201ENSMUST00000184561 445 ntBASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ccdc88aQ5SNZ0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccdc88aQ5SNZ0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms