Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.2■□□□□ 0.02
SfswapQ3USH5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SfswapQ3USH5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SfswapQ3USH5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SfswapQ3USH5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.19■□□□□ 0.02
SfswapQ3USH5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.19■□□□□ 0.02
SfswapQ3USH5 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.19■□□□□ 0.02
SfswapQ3USH5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.19■□□□□ 0.02
SfswapQ3USH5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SfswapQ3USH5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm13736-201ENSMUST00000119272 253 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm25043-201ENSMUST00000158604 212 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm16296-201ENSMUST00000159905 325 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm2383-201ENSMUST00000181461 807 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.18■□□□□ 0.02
SfswapQ3USH5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SfswapQ3USH5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm12058-201ENSMUST00000118614 437 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.17■□□□□ 0.02
SfswapQ3USH5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SfswapQ3USH5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SfswapQ3USH5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms