Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm6023-201ENSMUST00000118217 606 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm13316-201ENSMUST00000140537 691 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Daam2-202ENSMUST00000224595 1926 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nlrc4Q3UP24 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm43438-201ENSMUST00000198133 379 ntBASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.43□□□□□ -0.26
Nlrc4Q3UP24 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm13492-201ENSMUST00000119772 665 ntBASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm11964-201ENSMUST00000120982 444 ntBASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm6013-201ENSMUST00000212264 699 ntBASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm45930-201ENSMUST00000221330 292 ntBASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nlrc4Q3UP24 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms