Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc33Q3ULW6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm14208-201ENSMUST00000119645 678 ntBASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc33Q3ULW6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm11531-201ENSMUST00000117614 555 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm13665-201ENSMUST00000120830 528 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm27046-201ENSMUST00000182160 463 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 AA914427-201ENSMUST00000193194 1166 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc33Q3ULW6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms