Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Gm22058-201ENSMUST00000083393 310 ntBASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lins1Q3U1D0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm11930-201ENSMUST00000117788 190 ntBASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm44967-201ENSMUST00000207047 631 ntBASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lins1Q3U1D0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm12058-201ENSMUST00000118614 437 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm14017-201ENSMUST00000121934 386 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.14■□□□□ 0.01
Lins1Q3U1D0 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms