Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm15957-201ENSMUST00000118893 974 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm18032-201ENSMUST00000222541 538 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.44□□□□□ -0.74
Trim63Q38HM4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.44□□□□□ -0.74
Trim63Q38HM4 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.44□□□□□ -0.74
Trim63Q38HM4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm5587-201ENSMUST00000206270 674 ntBASIC10.44□□□□□ -0.74
Trim63Q38HM4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.44□□□□□ -0.74
Trim63Q38HM4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trim63Q38HM4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms