Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ebf1Q07802 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.93□□□□□ -0.34
Ebf1Q07802 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm38317-201ENSMUST00000195564 343 ntBASIC12.93□□□□□ -0.34
Ebf1Q07802 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.93□□□□□ -0.34
Ebf1Q07802 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.93□□□□□ -0.34
Ebf1Q07802 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.93□□□□□ -0.34
Ebf1Q07802 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ebf1Q07802 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Snord83b-201ENSMUST00000104546 94 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Paupar-201ENSMUST00000194826 3482 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.92□□□□□ -0.34
Ebf1Q07802 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.92□□□□□ -0.34
Ebf1Q07802 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ebf1Q07802 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm15276-201ENSMUST00000145953 498 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms