Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm13019-201ENSMUST00000120000 276 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm10774-201ENSMUST00000188689 204 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm5870-201ENSMUST00000196461 282 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm45598-202ENSMUST00000210719 986 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.69□□□□□ -0.38
Col9a1Q05722 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a1Q05722 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a1Q05722 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm12591-201ENSMUST00000122407 1177 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm28388-201ENSMUST00000186262 437 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm42591-201ENSMUST00000197249 700 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm44329-201ENSMUST00000197469 112 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.68□□□□□ -0.38
Col9a1Q05722 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm17831-201ENSMUST00000205579 900 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm44647-201ENSMUST00000207402 428 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Gm19009-201ENSMUST00000223072 823 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.68□□□□□ -0.38
Col9a1Q05722 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col9a1Q05722 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.68□□□□□ -0.38
Col9a1Q05722 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm24791-201ENSMUST00000104284 131 ntBASIC12.67□□□□□ -0.38
Col9a1Q05722 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm8756-201ENSMUST00000183250 929 ntBASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm28693-202ENSMUST00000190758 331 ntBASIC12.67□□□□□ -0.38
Col9a1Q05722 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms