Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43cP86449 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim43cP86449 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Trim43cP86449 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43cP86449 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Mir7085-201ENSMUST00000184353 66 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Gm19309-201ENSMUST00000218295 205 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43cP86449 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Trim43cP86449 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43cP86449 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.86□□□□□ -0.19
Trim43cP86449 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.85□□□□□ -0.19
Trim43cP86449 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim43cP86449 Gm43433-201ENSMUST00000196573 481 ntBASIC13.85□□□□□ -0.19
Trim43cP86449 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Gm24526-201ENSMUST00000082921 158 ntBASIC13.85□□□□□ -0.19
Trim43cP86449 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim43cP86449 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim43cP86449 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim43cP86449 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43cP86449 Daam2-202ENSMUST00000224595 1926 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim43cP86449 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim43cP86449 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim43cP86449 Gm5187-201ENSMUST00000117317 991 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim43cP86449 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim43cP86449 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim43cP86449 Gm18584-201ENSMUST00000203098 964 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Gm25857-201ENSMUST00000082788 129 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim43cP86449 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Trim43cP86449 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.84□□□□□ -0.19
Trim43cP86449 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Trim43cP86449 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms