Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Trim43bP86448 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim43bP86448 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim43bP86448 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim43bP86448 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim43bP86448 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43bP86448 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43bP86448 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trim43bP86448 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 Gm18473-201ENSMUST00000220543 868 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim43bP86448 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.14□□□□□ -0.31
Trim43bP86448 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim43bP86448 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.13□□□□□ -0.31
Trim43bP86448 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim43bP86448 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43bP86448 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43bP86448 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trim43bP86448 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim43bP86448 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim43bP86448 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.13□□□□□ -0.31
Trim43bP86448 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.13□□□□□ -0.31
Trim43bP86448 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trim43bP86448 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.13□□□□□ -0.31
Trim43bP86448 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim43bP86448 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim43bP86448 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.13□□□□□ -0.31
Trim43bP86448 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim43bP86448 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Daam2-202ENSMUST00000224595 1926 ntBASIC13.12□□□□□ -0.31
Trim43bP86448 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Gm13689-201ENSMUST00000119360 685 ntBASIC13.12□□□□□ -0.31
Trim43bP86448 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43bP86448 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms