Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.57□□□□□ -0.4
Shox2P70390 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Shox2P70390 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shox2P70390 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shox2P70390 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shox2P70390 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shox2P70390 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Shox2P70390 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.56□□□□□ -0.4
Shox2P70390 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Shox2P70390 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shox2P70390 Gm12485-201ENSMUST00000119641 291 ntBASIC12.56□□□□□ -0.4
Shox2P70390 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.56□□□□□ -0.4
Shox2P70390 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.56□□□□□ -0.4
Shox2P70390 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.56□□□□□ -0.4
Shox2P70390 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shox2P70390 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shox2P70390 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Shox2P70390 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.56□□□□□ -0.4
Shox2P70390 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Shox2P70390 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Shox2P70390 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Gm22065-201ENSMUST00000103753 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm22066-201ENSMUST00000103761 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24932-201ENSMUST00000103763 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24115-201ENSMUST00000103799 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm22190-201ENSMUST00000103827 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm22191-201ENSMUST00000103831 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24721-201ENSMUST00000103849 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm28018-201ENSMUST00000103869 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm26399-201ENSMUST00000103937 110 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms