Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cux2P70298 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cux2P70298 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cux2P70298 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cux2P70298 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cux2P70298 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cux2P70298 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC20.44■□□□□ 0.86
Cux2P70298 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.44■□□□□ 0.86
Cux2P70298 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cux2P70298 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Gm44891-201ENSMUST00000208817 2223 ntBASIC20.44■□□□□ 0.86
Cux2P70298 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC20.44■□□□□ 0.86
Cux2P70298 Gm14942-201ENSMUST00000119642 336 ntBASIC20.44■□□□□ 0.86
Cux2P70298 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC20.44■□□□□ 0.86
Cux2P70298 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Cux2P70298 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cux2P70298 Gm3318-201ENSMUST00000217604 1183 ntBASIC20.44■□□□□ 0.86
Cux2P70298 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cux2P70298 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cux2P70298 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cux2P70298 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Cux2P70298 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC20.43■□□□□ 0.86
Cux2P70298 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC20.43■□□□□ 0.86
Cux2P70298 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC20.43■□□□□ 0.86
Cux2P70298 AC102368.1-201ENSMUST00000227161 892 ntBASIC20.43■□□□□ 0.86
Cux2P70298 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC20.43■□□□□ 0.86
Cux2P70298 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cux2P70298 Ap5m1-205ENSMUST00000227431 3757 ntBASIC20.43■□□□□ 0.86
Cux2P70298 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Cux2P70298 Gm28386-201ENSMUST00000189147 1849 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cux2P70298 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Cux2P70298 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Gm12030-201ENSMUST00000121917 223 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Gm24844-201ENSMUST00000158679 127 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Gm18201-201ENSMUST00000174735 875 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC20.42■□□□□ 0.86
Cux2P70298 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cux2P70298 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cux2P70298 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 AC121960.1-201ENSMUST00000227982 564 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Gm10371-202ENSMUST00000228010 1081 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Gm4604-201ENSMUST00000025040 390 ntBASIC20.42■□□□□ 0.86
Cux2P70298 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cux2P70298 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cux2P70298 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Cux2P70298 Gm11979-201ENSMUST00000119629 743 ntBASIC20.41■□□□□ 0.86
Cux2P70298 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC20.41■□□□□ 0.86
Cux2P70298 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC20.41■□□□□ 0.86
Cux2P70298 Gm18706-201ENSMUST00000210053 1066 ntBASIC20.41■□□□□ 0.86
Cux2P70298 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Cux2P70298 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC20.41■□□□□ 0.86
Cux2P70298 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cux2P70298 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms