Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.95□□□□□ -0.5
Six5P70178 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Gm14660-201ENSMUST00000119809 575 ntBASIC11.95□□□□□ -0.5
Six5P70178 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Six5P70178 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.95□□□□□ -0.5
Six5P70178 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.95□□□□□ -0.5
Six5P70178 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.95□□□□□ -0.5
Six5P70178 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.95□□□□□ -0.5
Six5P70178 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Six5P70178 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Six5P70178 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.95□□□□□ -0.5
Six5P70178 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Six5P70178 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six5P70178 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.95□□□□□ -0.5
Six5P70178 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.94□□□□□ -0.5
Six5P70178 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.94□□□□□ -0.5
Six5P70178 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.94□□□□□ -0.5
Six5P70178 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.94□□□□□ -0.5
Six5P70178 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Six5P70178 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Gm27731-201ENSMUST00000185192 107 ntBASIC11.94□□□□□ -0.5
Six5P70178 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.94□□□□□ -0.5
Six5P70178 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.94□□□□□ -0.5
Six5P70178 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.94□□□□□ -0.5
Six5P70178 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Six5P70178 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.94□□□□□ -0.5
Six5P70178 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Six5P70178 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.93□□□□□ -0.5
Six5P70178 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms