Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Mir339-201ENSMUST00000083659 96 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.06□□□□□ -0.16
Hmgb1P63158 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.06□□□□□ -0.16
Hmgb1P63158 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb1P63158 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.05□□□□□ -0.16
Hmgb1P63158 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.05□□□□□ -0.16
Hmgb1P63158 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.05□□□□□ -0.16
Hmgb1P63158 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.05□□□□□ -0.16
Hmgb1P63158 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.05□□□□□ -0.16
Hmgb1P63158 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.05□□□□□ -0.16
Hmgb1P63158 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hmgb1P63158 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb1P63158 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgb1P63158 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Gm8805-201ENSMUST00000117848 313 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 Proscos-202ENSMUST00000178990 666 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Gm37922-201ENSMUST00000195596 455 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Gm8598-201ENSMUST00000221184 836 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms