Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm37201-201ENSMUST00000191845 523 ntBASIC13.06□□□□□ -0.32
Ybx1P62960 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ybx1P62960 Gm19208-201ENSMUST00000213861 912 ntBASIC13.06□□□□□ -0.32
Ybx1P62960 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.06□□□□□ -0.32
Ybx1P62960 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.06□□□□□ -0.32
Ybx1P62960 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.06□□□□□ -0.32
Ybx1P62960 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.06□□□□□ -0.32
Ybx1P62960 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ybx1P62960 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ybx1P62960 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ybx1P62960 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.05□□□□□ -0.32
Ybx1P62960 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.05□□□□□ -0.32
Ybx1P62960 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ybx1P62960 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.05□□□□□ -0.32
Ybx1P62960 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.05□□□□□ -0.32
Ybx1P62960 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.05□□□□□ -0.32
Ybx1P62960 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.05□□□□□ -0.32
Ybx1P62960 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.05□□□□□ -0.32
Ybx1P62960 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Gm8385-201ENSMUST00000058999 643 ntBASIC13.05□□□□□ -0.32
Ybx1P62960 Mir339-201ENSMUST00000083659 96 ntBASIC13.05□□□□□ -0.32
Ybx1P62960 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ybx1P62960 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ybx1P62960 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ybx1P62960 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ybx1P62960 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm16296-201ENSMUST00000159905 325 ntBASIC13.04□□□□□ -0.32
Ybx1P62960 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.04□□□□□ -0.32
Ybx1P62960 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.04□□□□□ -0.32
Ybx1P62960 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.04□□□□□ -0.32
Ybx1P62960 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.04□□□□□ -0.32
Ybx1P62960 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.04□□□□□ -0.32
Ybx1P62960 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ybx1P62960 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ybx1P62960 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.04□□□□□ -0.32
Ybx1P62960 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms