Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nup43P59235 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nup43P59235 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Nup43P59235 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.04□□□□□ -0.48
Nup43P59235 Gm5187-201ENSMUST00000117317 991 ntBASIC12.04□□□□□ -0.48
Nup43P59235 Gm12502-201ENSMUST00000120197 444 ntBASIC12.04□□□□□ -0.48
Nup43P59235 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.04□□□□□ -0.48
Nup43P59235 Gm7809-201ENSMUST00000153199 742 ntBASIC12.04□□□□□ -0.48
Nup43P59235 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.04□□□□□ -0.48
Nup43P59235 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.04□□□□□ -0.48
Nup43P59235 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup43P59235 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nup43P59235 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.04□□□□□ -0.48
Nup43P59235 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.04□□□□□ -0.48
Nup43P59235 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.04□□□□□ -0.48
Nup43P59235 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.04□□□□□ -0.48
Nup43P59235 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nup43P59235 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nup43P59235 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Nup43P59235 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm8062-201ENSMUST00000139696 444 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm8738-201ENSMUST00000172606 329 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nup43P59235 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nup43P59235 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm19087-201ENSMUST00000191430 946 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Gm38092-201ENSMUST00000195600 653 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.03□□□□□ -0.48
Nup43P59235 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nup43P59235 Gm24526-201ENSMUST00000082921 158 ntBASIC12.03□□□□□ -0.48
Nup43P59235 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup43P59235 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms