Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nub1P54729 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.77□□□□□ -0.21
Nub1P54729 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nub1P54729 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.77□□□□□ -0.21
Nub1P54729 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Nub1P54729 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nub1P54729 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Nub1P54729 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.76□□□□□ -0.21
Nub1P54729 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nub1P54729 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Nub1P54729 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.76□□□□□ -0.21
Nub1P54729 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nub1P54729 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.76□□□□□ -0.21
Nub1P54729 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.76□□□□□ -0.21
Nub1P54729 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.76□□□□□ -0.21
Nub1P54729 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.76□□□□□ -0.21
Nub1P54729 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Nub1P54729 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nub1P54729 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nub1P54729 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.75□□□□□ -0.21
Nub1P54729 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.75□□□□□ -0.21
Nub1P54729 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.75□□□□□ -0.21
Nub1P54729 Mir7085-201ENSMUST00000184353 66 ntBASIC13.75□□□□□ -0.21
Nub1P54729 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nub1P54729 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.75□□□□□ -0.21
Nub1P54729 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.75□□□□□ -0.21
Nub1P54729 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nub1P54729 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nub1P54729 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Nub1P54729 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nub1P54729 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.74□□□□□ -0.21
Nub1P54729 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms