Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox1P53783 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sox1P53783 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Gm13022-201ENSMUST00000121181 285 ntBASIC12.99□□□□□ -0.33
Sox1P53783 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox1P53783 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Gm22442-201ENSMUST00000157256 144 ntBASIC12.99□□□□□ -0.33
Sox1P53783 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Sox1P53783 Gm28196-201ENSMUST00000187719 640 ntBASIC12.99□□□□□ -0.33
Sox1P53783 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox1P53783 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Gm37299-201ENSMUST00000193951 826 ntBASIC12.99□□□□□ -0.33
Sox1P53783 Gm43520-201ENSMUST00000197996 164 ntBASIC12.99□□□□□ -0.33
Sox1P53783 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.99□□□□□ -0.33
Sox1P53783 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox1P53783 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox1P53783 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox1P53783 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox1P53783 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox1P53783 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.98□□□□□ -0.33
Sox1P53783 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Sox1P53783 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox1P53783 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm22144-201ENSMUST00000157402 102 ntBASIC12.98□□□□□ -0.33
Sox1P53783 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox1P53783 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox1P53783 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox1P53783 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox1P53783 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox1P53783 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms