Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RoraP51448 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RoraP51448 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
RoraP51448 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RoraP51448 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.09□□□□□ -0.47
RoraP51448 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.09□□□□□ -0.47
RoraP51448 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Gm4857-201ENSMUST00000192718 785 ntBASIC12.09□□□□□ -0.47
RoraP51448 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.09□□□□□ -0.47
RoraP51448 Gm8099-201ENSMUST00000200510 742 ntBASIC12.09□□□□□ -0.47
RoraP51448 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.09□□□□□ -0.47
RoraP51448 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RoraP51448 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RoraP51448 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Grk6-205ENSMUST00000224653 2976 ntBASIC12.09□□□□□ -0.47
RoraP51448 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RoraP51448 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RoraP51448 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RoraP51448 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RoraP51448 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RoraP51448 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RoraP51448 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Gm12502-201ENSMUST00000120197 444 ntBASIC12.08□□□□□ -0.48
RoraP51448 Gm11964-201ENSMUST00000120982 444 ntBASIC12.08□□□□□ -0.48
RoraP51448 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.08□□□□□ -0.48
RoraP51448 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.08□□□□□ -0.48
RoraP51448 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.08□□□□□ -0.48
RoraP51448 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.08□□□□□ -0.48
RoraP51448 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.08□□□□□ -0.48
RoraP51448 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.08□□□□□ -0.48
RoraP51448 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.08□□□□□ -0.48
RoraP51448 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
RoraP51448 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RoraP51448 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms