Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nkx2-1P50220 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm38294-201ENSMUST00000192831 381 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nkx2-1P50220 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.57□□□□□ -0.72
Nkx2-1P50220 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Cog3-203ENSMUST00000227473 4197 ntBASIC10.56□□□□□ -0.72
Nkx2-1P50220 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm17795-201ENSMUST00000214505 757 ntBASIC10.56□□□□□ -0.72
Nkx2-1P50220 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.56□□□□□ -0.72
Nkx2-1P50220 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.56□□□□□ -0.72
Nkx2-1P50220 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms