Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.21□□□□□ -0.61
GdnfP48540 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
GdnfP48540 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
GdnfP48540 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Daam2-202ENSMUST00000224595 1926 ntBASIC11.21□□□□□ -0.62
GdnfP48540 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
GdnfP48540 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.21□□□□□ -0.62
GdnfP48540 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.21□□□□□ -0.62
GdnfP48540 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
GdnfP48540 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.2□□□□□ -0.62
GdnfP48540 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
GdnfP48540 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
GdnfP48540 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
GdnfP48540 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.2□□□□□ -0.62
GdnfP48540 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.2□□□□□ -0.62
GdnfP48540 Gm29608-201ENSMUST00000190444 463 ntBASIC11.2□□□□□ -0.62
GdnfP48540 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
GdnfP48540 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.2□□□□□ -0.62
GdnfP48540 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
GdnfP48540 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Gm18624-201ENSMUST00000220966 658 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Gm19220-201ENSMUST00000222682 803 ntBASIC11.2□□□□□ -0.62
GdnfP48540 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Gm5161-201ENSMUST00000075243 853 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
GdnfP48540 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
GdnfP48540 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
GdnfP48540 Gm24447-201ENSMUST00000083977 338 ntBASIC11.2□□□□□ -0.62
GdnfP48540 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
GdnfP48540 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
GdnfP48540 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.19□□□□□ -0.62
GdnfP48540 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
GdnfP48540 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.19□□□□□ -0.62
GdnfP48540 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Gm13689-201ENSMUST00000119360 685 ntBASIC11.19□□□□□ -0.62
GdnfP48540 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.19□□□□□ -0.62
GdnfP48540 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.19□□□□□ -0.62
GdnfP48540 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.19□□□□□ -0.62
GdnfP48540 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
GdnfP48540 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.19□□□□□ -0.62
GdnfP48540 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.19□□□□□ -0.62
GdnfP48540 Gm17330-201ENSMUST00000221047 165 ntBASIC11.19□□□□□ -0.62
GdnfP48540 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.19□□□□□ -0.62
GdnfP48540 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.19□□□□□ -0.62
GdnfP48540 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
GdnfP48540 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms