Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Gm15321-201ENSMUST00000121290 288 ntBASIC10.54□□□□□ -0.72
Hist1h1aP43275 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Gm38223-201ENSMUST00000194484 695 ntBASIC10.54□□□□□ -0.72
Hist1h1aP43275 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.54□□□□□ -0.72
Hist1h1aP43275 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.54□□□□□ -0.72
Hist1h1aP43275 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.54□□□□□ -0.72
Hist1h1aP43275 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist1h1aP43275 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm22189-201ENSMUST00000103822 86 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm15371-201ENSMUST00000117057 784 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm6447-201ENSMUST00000118905 835 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.53□□□□□ -0.72
Hist1h1aP43275 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.53□□□□□ -0.72
Hist1h1aP43275 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms