Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cdx2P43241 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Gm11597-201ENSMUST00000121423 964 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdx2P43241 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Gm7467-201ENSMUST00000185173 652 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdx2P43241 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Gm37835-201ENSMUST00000193305 361 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdx2P43241 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdx2P43241 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdx2P43241 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.09□□□□□ -0.47
Cdx2P43241 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdx2P43241 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdx2P43241 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdx2P43241 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdx2P43241 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cdx2P43241 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Cdx2P43241 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm14644-201ENSMUST00000116671 647 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Gm13813-201ENSMUST00000120998 787 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdx2P43241 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdx2P43241 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Cdx2P43241 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.08□□□□□ -0.48
Cdx2P43241 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdx2P43241 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdx2P43241 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms