Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.15□□□□□ -0.3
HttP42859 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.15□□□□□ -0.3
HttP42859 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.15□□□□□ -0.3
HttP42859 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HttP42859 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.15□□□□□ -0.3
HttP42859 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HttP42859 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HttP42859 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.15□□□□□ -0.31
HttP42859 Gm12036-201ENSMUST00000120008 530 ntBASIC13.15□□□□□ -0.31
HttP42859 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.15□□□□□ -0.31
HttP42859 Mir7221-201ENSMUST00000184009 72 ntBASIC13.15□□□□□ -0.31
HttP42859 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
HttP42859 Gm39288-201ENSMUST00000210554 446 ntBASIC13.15□□□□□ -0.31
HttP42859 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HttP42859 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HttP42859 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HttP42859 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Gm11619-201ENSMUST00000117474 237 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm26134-201ENSMUST00000178484 110 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm9136-201ENSMUST00000193368 454 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm5714-201ENSMUST00000197343 566 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.14□□□□□ -0.31
HttP42859 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HttP42859 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HttP42859 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.14□□□□□ -0.31
HttP42859 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Gm11511-201ENSMUST00000118146 540 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.14□□□□□ -0.31
HttP42859 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HttP42859 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.14□□□□□ -0.31
HttP42859 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.14□□□□□ -0.31
HttP42859 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.14□□□□□ -0.31
HttP42859 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HttP42859 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Gm12791-201ENSMUST00000120788 655 ntBASIC13.13□□□□□ -0.31
HttP42859 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Gm24954-201ENSMUST00000178831 110 ntBASIC13.13□□□□□ -0.31
HttP42859 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Gm5599-201ENSMUST00000209602 788 ntBASIC13.13□□□□□ -0.31
HttP42859 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.13□□□□□ -0.31
HttP42859 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HttP42859 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HttP42859 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HttP42859 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Defa-ps17-201ENSMUST00000121849 171 ntBASIC13.13□□□□□ -0.31
HttP42859 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HttP42859 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms