Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Gm9908-201ENSMUST00000211534 448 ntBASIC15.67■□□□□ 0.1
Nkx1-2P42580 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx1-2P42580 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm27390-201ENSMUST00000184516 176 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm38671-201ENSMUST00000200573 130 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx1-2P42580 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.66■□□□□ 0.1
Nkx1-2P42580 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Gm8805-201ENSMUST00000117848 313 ntBASIC15.65■□□□□ 0.1
Nkx1-2P42580 Gm13123-201ENSMUST00000122173 492 ntBASIC15.65■□□□□ 0.1
Nkx1-2P42580 Gm10156-201ENSMUST00000122364 462 ntBASIC15.65■□□□□ 0.1
Nkx1-2P42580 Gm7063-201ENSMUST00000186840 981 ntBASIC15.65■□□□□ 0.1
Nkx1-2P42580 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.65■□□□□ 0.1
Nkx1-2P42580 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx1-2P42580 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Nkx1-2P42580 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
Nkx1-2P42580 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx1-2P42580 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms